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    CYP87A2 cytochrome P450, family 87, subfamily A, polypeptide 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837830, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP87A2
    Official Full Name
    cytochrome P450, family 87, subfamily A, polypeptide 2
    Primary source
    TAIR:AT1G12740
    Locus tag
    AT1G12740
    See related
    Araport:AT1G12740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 87; polypeptide 2; polypeptide 2''; subfamily A; T12C24.27; T12C24_27
    Summary
    encodes a protein with cytochrome P450 domain
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    Genomic context

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    See CYP87A2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (4342209..4344875)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GPI transamidase subunit PIG-U Neighboring gene ncRNA Neighboring gene RHOMBOID-like protein 6 Neighboring gene Zinc finger, C3HC4 type (RING finger) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001198045.1
    NM_001332045.1
    NM_001332046.1
    NM_101144.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 87, subfamily A, polypeptide 2
    NP_001184974.1
    • ''cytochrome P450, family 87, subfamily A, polypeptide 2'' (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1).
    NP_172734.2
    • ''cytochrome P450, family 87, subfamily A, polypeptide 2'' (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 31076 Blast hits to 30988 proteins in 1655 species: Archae - 56; Bacteria - 5533; Metazoa - 10873; Fungi - 5392; Plants - 7791; Viruses - 3; Other Eukaryotes - 1428 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4342209..4344875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101144.5 → NP_172734.2  cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172734.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WN34, Q6NPN1
      Conserved Domains (1) summary
      cl12078
      Location:4 → 469
      p450; Cytochrome P450

    2. NM_001332045.1 → NP_001320967.1  cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APH3

    3. NM_001332046.1 → NP_001320968.1  cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WN34, Q9LN73

    4. NM_001198045.1 → NP_001184974.1  cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001184974.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WN34, F4IDV9
      Conserved Domains (1) summary
      cl12078
      Location:4 → 475
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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