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    ATPC2 ATPase, F1 complex, gamma subunit protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838139, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATPC2
    Official Full Name
    ATPase, F1 complex, gamma subunit protein
    Primary source
    TAIR:AT1G15700
    Locus tag
    AT1G15700
    See related
    Araport:AT1G15700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7H2.4; F7H2_4
    Summary
    One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity.
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    Genomic context

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    See ATPC2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (5402569..5403818, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene ncRNA Neighboring gene Inorganic H pyrophosphatase family protein Neighboring gene ncRNA Neighboring gene prephenate dehydrogenase family protein Neighboring gene ncRNA Neighboring gene TRF-like 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Thioredoxin-insensitive plastid ATP synthase that performs moonlighting functions. Kohzuma K, et al. Proc Natl Acad Sci U S A, 2012 Feb 28. PMID 22328157, Free PMC Article
    2. Two genes, atpC1 and atpC2, for the gamma subunit of Arabidopsis thaliana chloroplast ATP synthase. Inohara N, et al. J Biol Chem, 1991 Apr 25. PMID 1826905
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_101438.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables enzyme regulator activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    contributes_to proton-transporting ATP synthase activity, rotational mechanism IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within proton motive force-driven ATP synthesis TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of root morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    part_of proton-transporting ATP synthase complex TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATPase, F1 complex, gamma subunit protein
    NP_173022.1
    • ATPC2; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT4G04640.1); Has 9547 Blast hits to 9544 proteins in 2715 species: Archae - 5; Bacteria - 5540; Metazoa - 280; Fungi - 148; Plants - 177; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5402569..5403818 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101438.2 → NP_173022.1  ATPase, F1 complex, gamma subunit protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173022.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q01909
      UniProtKB/TrEMBL
      A0A178WD21, A0A5S9UJN2
      Conserved Domains (1) summary
      pfam00231
      Location:64 → 383
      ATP-synt; ATP synthase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q01909.1

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