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    DD11 downregulated in DIF1 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841730, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DD11
    Official Full Name
    downregulated in DIF1 11
    Primary source
    TAIR:AT1G52970
    Locus tag
    AT1G52970
    See related
    Araport:AT1G52970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    downregulated in DIF1 11; F14G24.24; F14G24_24
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    Genomic context

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    See DD11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (19736482..19737083, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene pseudo Neighboring gene GTP-binding family protein Neighboring gene thioredoxin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins. Punwani JA, et al. Plant Cell, 2007 Aug. PMID 17693534, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104175.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in filiform apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    downregulated in DIF1 11
    NP_175705.1
    • downregulated in DIF1 11 (DD11); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502); BEST Arabidopsis thaliana protein match is: downregulated in DIF1 18 (TAIR:AT1G45190.1); Has 99 Blast hits to 99 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19736482..19737083 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104175.2 → NP_175705.1  downregulated in DIF1 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175705.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C924
      UniProtKB/TrEMBL
      A0A178W600, A0A5S9WR99
      Conserved Domains (1) summary
      pfam05617
      Location:63 → 133
      Prolamin_like; Prolamin-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C924.1

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