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    Stigma-specific Stig1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837743, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Stigma-specific Stig1 family protein
    Primary source
    TAIR:AT1G11925
    Locus tag
    AT1G11925
    See related
    Araport:AT1G11925
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes a Stigma-specific Stig1 family protein
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (4025930..4026733, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase galacturonan-binding protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene Putative pyridoxal phosphate-dependent enzyme, YBL036C type Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_148459.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Stigma-specific Stig1 family protein
    NP_683300.2
    • Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT1G50720.1); Has 350 Blast hits to 216 proteins in 35 species: Archae - 0; Bacteria - 116; Metazoa - 3; Fungi - 54; Plants - 172; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4025930..4026733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_148459.3 → NP_683300.2  Stigma-specific Stig1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_683300.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O65387
      Conserved Domains (1) summary
      pfam04885
      Location:12 → 140
      Stig1; Stigma-specific protein, Stig1
    Nucleotide Protein
    Heading Accession and Version

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