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    Gr39a Gustatory receptor 39a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 117346, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gr39aprovided by FlyBase
    Official Full Name
    Gustatory receptor 39aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0264556
    Locus tag
    Dmel_CG31622
    See related
    AllianceGenome:FB:FBgn0264556
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    39D.2; 39D.2a; 39D.2b; 39D.2c; 39D.2d; 39D2a; 39D2b; 39D2c; 39D2d; CG31622; Dmel\CG31622; gene Y; GR39a; Gr39a.a; Gr39a.b; Gr39a.c; Gr39a.d; Gr39aA; Gr39aB; Gr39aC; Gr39aD; GR39D.2; Gr39D2a; Gr39D2A; Gr39D2b; Gr39D2c; Gr39D2d; l(2)k05106
    Summary
    Predicted to enable ligand-gated monoatomic ion channel activity. Involved in male courtship behavior. Predicted to be located in membrane. Predicted to be active in several cellular components, including axon; dendrite; and neuronal cell body. Is expressed in adult abdominal multidendritic neurons; adult labellum sensillum; gustatory receptor neurons; larval gnathal ganglion; and tarsal segment. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Gr39a in Genome Data Viewer
    Location:
    39C1-39C1; 2-54 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21290734..21297686)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21290734..21297686)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene mir-4974 stem loop Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene mondo Neighboring gene long non-coding RNA:CR44785 Neighboring gene cryptocephal Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    mobile_element

    • Loc: 21295523-21295735 mobile_element_type = transposon:INE-1{}4057

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ligand-gated monoatomic ion channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables taste receptor activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chemosensory behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in male courtship behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in male courtship behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in monoatomic ion transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sensory perception of taste IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of taste NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in axon IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in dendrite IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    is_active_in neuronal cell body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    gustatory receptor 39a
    Names
    CG31622-PA
    CG31622-PB
    CG31622-PC
    CG31622-PD
    Gr39a-PA
    Gr39a-PB
    Gr39a-PC
    Gr39a-PD
    gustatory receptor 39D.2
    lethal (2) k05106

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      21290734..21297686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165370.1NP_724329.1  gustatory receptor 39a, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724329.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P58956
      Related
      FBpp0081036, FBtr0081508
      Conserved Domains (1) summary
      pfam08395
      Location:8363
      7tm_7; 7tm Chemosensory receptor
    2. NM_165371.1NP_724330.1  gustatory receptor 39a, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724330.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P58957
      Related
      FBpp0081037, FBtr0081509
      Conserved Domains (1) summary
      pfam08395
      Location:8372
      7tm_7; 7tm Chemosensory receptor
    3. NM_165372.1NP_724331.1  gustatory receptor 39a, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724331.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P58958
      Related
      FBpp0081038, FBtr0081510
      Conserved Domains (1) summary
      pfam08395
      Location:9372
      7tm_7; 7tm Chemosensory receptor
    4. NM_165373.1NP_724332.1  gustatory receptor 39a, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724332.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P58959
      Related
      FBpp0081039, FBtr0081511
      Conserved Domains (1) summary
      pfam08395
      Location:8362
      7tm_7; 7tm Chemosensory receptor