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    lncRNA:CR43302 long non-coding RNA:CR43302 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798065, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR43302provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43302provided by FlyBase
    Primary source
    FLYBASE:FBgn0262994
    Locus tag
    Dmel_CR43302
    See related
    AllianceGenome:FB:FBgn0262994
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43302; Dmel\CR43302
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    Genomic context

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    See lncRNA:CR43302 in Genome Data Viewer
    Location:
    84F2-84F2; 3-48 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8197320..8197711, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4023042..4023433, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene transfer RNA:Arginine-ACG 1-10 Neighboring gene grain Neighboring gene long non-coding RNA:CR43303 Neighboring gene Chemosensory protein A 84a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis. Koenecke N, et al. Genome Biol, 2016 Sep 27. PMID 27678375, Free PMC Article
    2. The Drosophila embryo at single-cell transcriptome resolution. Karaiskos N, et al. Science, 2017 Oct 13. PMID 28860209
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43302-RA; Dmel\lncRNA:CR43302-RA; CR43302-RA; Dmel\CR43302-RA
    • lncRNA:CR43302-RB; Dmel\lncRNA:CR43302-RB; CR43302-RB; Dmel\CR43302-RB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      8197320..8197711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_048343.1 RNA Sequence

      Status: REVIEWED

    2. NR_048344.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.