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    RpL28 Ribosomal protein L28 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38397, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL28provided by FlyBase
    Official Full Name
    Ribosomal protein L28provided by FlyBase
    Primary source
    FLYBASE:FBgn0035422
    Locus tag
    Dmel_CG12740
    See related
    AllianceGenome:FB:FBgn0035422
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.321; BcDNA:GH04183; CG12740; chr3L:3205394..3205484; Dmel\CG12740; GH04183p; L28; L28e; Rpl28
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head and adult heart. Orthologous to human RPL28 (ribosomal protein L28). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL28 in Genome Data Viewer
    Location:
    63B14-63B14; 3-6 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (3220911..3222960, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (3220911..3222960, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene gryzun Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hobbit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene neutral sphingomyelinase Neighboring gene eukaryotic translation initiation factor 1 Neighboring gene La-related protein 4B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Opbp is a new architectural/insulator protein required for ribosomal gene expression. Zolotarev N, et al. Nucleic Acids Res, 2017 Dec 1. PMID 29036346, Free PMC Article
    2. The Ribosomal Protein RpL22 Interacts In Vitro with 5'-UTR Sequences Found in Some Drosophila melanogaster Transposons. Minervini CF, et al. Genes (Basel), 2022 Feb 5. PMID 35205350, Free PMC Article
    3. Viability, longevity, and egg production of Drosophila melanogaster are regulated by the miR-282 microRNA. Vilmos P, et al. Genetics, 2013 Oct. PMID 23852386, Free PMC Article
    4. Quantitative proteomic analysis of protein complexes: concurrent identification of interactors and their state of phosphorylation. Pflieger D, et al. Mol Cell Proteomics, 2008 Feb. PMID 17956857
    5. Ribosome components are associated with sites of transcription. Brogna S, et al. Mol Cell, 2002 Jul. PMID 12150910

    See all (64) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein L28
    Names
    60 S ribosomal protein L28
    CG12740-PA
    CG12740-PB
    CG12740-PD
    CG12740-PE
    CG12740-PF
    CG12740-PG
    RpL28-PA
    RpL28-PB
    RpL28-PD
    RpL28-PE
    RpL28-PF
    RpL28-PG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      3220911..3222960 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168004.2 → NP_728839.1  ribosomal protein L28, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728839.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1E2, Q0E8I7, Q9VZS5
      UniProtKB/TrEMBL
      D1Z3A1, Q9VZS4
      Related
      FBpp0072957
      Conserved Domains (1) summary
      pfam01778
      Location:7 → 123
      Ribosomal_L28e; Ribosomal L28e protein family

    2. NM_139534.4 → NP_647791.2  ribosomal protein L28, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647791.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1E2, Q0E8I7, Q9VZS5
      UniProtKB/TrEMBL
      D1Z3A1, Q9VZS4
      Related
      FBpp0072959
      Conserved Domains (1) summary
      pfam01778
      Location:7 → 123
      Ribosomal_L28e; Ribosomal L28e protein family

    3. NM_001169866.2 → NP_001163337.1  ribosomal protein L28, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163337.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1E2, Q0E8I7, Q9VZS5
      UniProtKB/TrEMBL
      D1Z3A1, Q9VZS4
      Conserved Domains (1) summary
      pfam01778
      Location:7 → 123
      Ribosomal_L28e; Ribosomal L28e protein family

    4. NM_168006.3 → NP_728841.2  ribosomal protein L28, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728841.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1E2, Q0E8I7, Q9VZS5
      UniProtKB/TrEMBL
      D1Z3A1, Q9VZS4
      Conserved Domains (1) summary
      pfam01778
      Location:7 → 123
      Ribosomal_L28e; Ribosomal L28e protein family

    5. NM_001169865.2 → NP_001163336.1  ribosomal protein L28, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163336.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1E2, Q0E8I7, Q9VZS5
      UniProtKB/TrEMBL
      D1Z3A1, Q9VZS4
      Conserved Domains (1) summary
      pfam01778
      Location:7 → 123
      Ribosomal_L28e; Ribosomal L28e protein family

    6. NM_168005.3 → NP_728840.1  ribosomal protein L28, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728840.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1E2, Q0E8I7, Q9VZS5
      UniProtKB/TrEMBL
      D1Z3A1, Q9VZS4
      Related
      FBpp0072960
      Conserved Domains (1) summary
      pfam01778
      Location:7 → 123
      Ribosomal_L28e; Ribosomal L28e protein family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    D1Z3A1 D1Z3A1
    Q9VZS5.1 Q9VZS5

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