U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RNA-binding (RRM/RBD/RNP motifs) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818107, updated on 18-Sep-2024

    Summary

    Official Full Name
    RNA-binding (RRM/RBD/RNP motifs) family protein
    Primary source
    TAIR:AT2G35410
    Locus tag
    AT2G35410
    See related
    Araport:AT2G35410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T32F12.21; T32F12_21
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (14898256..14899750)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Phosphoribosyltransferase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

    General protein information

    Preferred Names
    RNA-binding (RRM/RBD/RNP motifs) family protein
    NP_181084.1
    • RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G09040.1); Has 25515 Blast hits to 17648 proteins in 833 species: Archae - 12; Bacteria - 2210; Metazoa - 12015; Fungi - 3602; Plants - 4930; Viruses - 0; Other Eukaryotes - 2746 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14898256..14899750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129093.4NP_181084.1  RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181084.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0G5, O82299
      Conserved Domains (2) summary
      TIGR01628
      Location:97279
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd00590
      Location:97168
      RRM_SF; RNA recognition motif (RRM) superfamily