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    S-locus lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837670, updated on 18-Sep-2024

    Summary

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    Official Full Name
    S-locus lectin protein kinase family protein
    Primary source
    TAIR:AT1G11280
    Locus tag
    AT1G11280
    See related
    Araport:AT1G11280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T28P6.7; T28P6_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (3787318..3790935, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene sugar transporter 1 Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene pseudo Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene G-type lectin S-receptor-like Serine/Threonine-kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of distinct self-incompatibility specificities in Arabidopsis thaliana. Boggs NA, et al. Genetics, 2009 Aug. PMID 19506308, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001035945.1
    NM_001331974.1
    NM_101001.3
    NM_179305.3
    NM_179306.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in recognition of pollen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    S-locus lectin protein kinase family protein
    NP_001031022.1
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_563887.1
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119990 Blast hits to 118206 proteins in 4416 species: Archae - 104; Bacteria - 13409; Metazoa - 44077; Fungi - 9917; Plants - 34701; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
    NP_849636.1
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119975 Blast hits to 118187 proteins in 4400 species: Archae - 104; Bacteria - 13364; Metazoa - 44144; Fungi - 9898; Plants - 34683; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
    NP_849637.1
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 119306 Blast hits to 117553 proteins in 4294 species: Archae - 104; Bacteria - 13114; Metazoa - 43962; Fungi - 9889; Plants - 34469; Viruses - 418; Other Eukaryotes - 17350 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3787318..3790935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101001.3 → NP_563887.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563887.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAM2
      Conserved Domains (6) summary
      smart00219
      Location:520 → 788
      TyrKc; Tyrosine kinase, catalytic domain
      smart00108
      Location:43 → 160
      B_lectin; Bulb-type mannose-specific lectin
      cd00028
      Location:43 → 161
      B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
      cd14066
      Location:521 → 789
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:220 → 327
      S_locus_glycop; S-locus glycoprotein domain
      pfam08276
      Location:358 → 418
      PAN_2; PAN-like domain

    2. NM_179305.3 → NP_849636.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849636.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EDE4, Q8H7E6, Q93ZU9, Q9SXB3
      UniProtKB/TrEMBL
      A0A178WAM2, A0A654EJK4
      Conserved Domains (4) summary
      cd14066
      Location:511 → 779
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:210 → 317
      S_locus_glycop; S-locus glycoprotein domain
      pfam01453
      Location:76 → 177
      B_lectin; D-mannose binding lectin
      pfam08276
      Location:348 → 408
      PAN_2; PAN-like domain

    3. NM_001331974.1 → NP_001323166.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAM2, A0A1P8AW73

    4. NM_179306.2 → NP_849637.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849637.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAM2
      Conserved Domains (6) summary
      smart00219
      Location:498 → 766
      TyrKc; Tyrosine kinase, catalytic domain
      smart00108
      Location:33 → 150
      B_lectin; Bulb-type mannose-specific lectin
      cd00028
      Location:33 → 151
      B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
      cd14066
      Location:499 → 767
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:210 → 317
      S_locus_glycop; S-locus glycoprotein domain
      pfam08276
      Location:348 → 408
      PAN_2; PAN-like domain

    5. NM_001035945.1 → NP_001031022.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031022.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAM2, F4I7F8
      Conserved Domains (6) summary
      smart00219
      Location:508 → 776
      TyrKc; Tyrosine kinase, catalytic domain
      smart00108
      Location:43 → 160
      B_lectin; Bulb-type mannose-specific lectin
      cd00028
      Location:43 → 161
      B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
      cd14066
      Location:509 → 777
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:220 → 327
      S_locus_glycop; S-locus glycoprotein domain
      pfam08276
      Location:358 → 418
      PAN_2; PAN-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SXB3.1

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