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    SIAR1 nodulin MtN21 /EamA-like transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841044, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SIAR1
    Official Full Name
    nodulin MtN21 /EamA-like transporter family protein
    Primary source
    TAIR:AT1G44800
    Locus tag
    AT1G44800
    See related
    Araport:AT1G44800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Siliques Are Red 1; T12C22.7; T12C22_7; UMAMIT18; Usually multiple acids move in and out Transporters 18
    Summary
    Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.
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    Genomic context

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    See SIAR1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (16913994..16917053, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene elongation factor Neighboring gene translation initiation factor Neighboring gene ChaC-like family protein Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator Neighboring gene Peptidase M20/M25/M40 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Siliques are Red1 from Arabidopsis acts as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Ladwig F, et al. Plant Physiol, 2012 Apr. PMID 22312005, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SIAR1-mediated export of amino acids plays an important role in organic nitrogen allocation and particularly in amino acid homeostasis in developing siliques.[SIAR1]
      Title: Siliques are Red1 from Arabidopsis acts as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103561.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables L-amino acid efflux transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables amino acid transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within amino acid export across plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within amino acid import IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within amino acid transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within intracellular amino acid homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nodulin MtN21 /EamA-like transporter family protein
    NP_175101.1
    • nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G08300.1); Has 4156 Blast hits to 4146 proteins in 764 species: Archae - 34; Bacteria - 2214; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16913994..16917053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103561.4 → NP_175101.1  nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175101.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LEI9, Q9LPF1
      UniProtKB/TrEMBL
      A0A178W1N5, A0A5S9WMJ8
      Conserved Domains (1) summary
      PLN00411
      Location:14 → 333
      PLN00411; nodulin MtN21 family protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LPF1.1

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