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    SNARE associated Golgi protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841061, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SNARE associated Golgi protein family
    Primary source
    TAIR:AT1G44960
    Locus tag
    AT1G44960
    See related
    Araport:AT1G44960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12C22.23; T12C22_23
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (16999446..17001734)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Peroxidase superfamily protein Neighboring gene pectin methylesterase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103576.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    SNARE associated Golgi protein family
    NP_175116.2
    • SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); Has 1433 Blast hits to 1432 proteins in 513 species: Archae - 4; Bacteria - 1059; Metazoa - 2; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16999446..17001734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103576.5 → NP_175116.2  SNARE associated Golgi protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175116.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WJI9, A0A654EG29, Q9LPD5
      Conserved Domains (1) summary
      pfam09335
      Location:63 → 185
      SNARE_assoc; SNARE associated Golgi protein
    Nucleotide Protein
    Heading Accession and Version

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