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    SP1L2 SPIRAL1-like2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843254, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SP1L2
    Official Full Name
    SPIRAL1-like2
    Primary source
    TAIR:AT1G69230
    Locus tag
    AT1G69230
    See related
    Araport:AT1G69230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4N2.18; SPIRAL1-like2
    Summary
    SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.
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    Genomic context

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    See SP1L2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (26026253..26027771, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene fructokinase-like protein Neighboring gene Uncharacterized protein family UPF0090 Neighboring gene Protein kinase superfamily protein Neighboring gene methyl esterase 15 Neighboring gene Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SPIRAL1 encodes a plant-specific microtubule-localized protein required for directional control of rapidly expanding Arabidopsis cells. Nakajima K, et al. Plant Cell, 2004 May. PMID 15084720, Free PMC Article
    2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105590.3
    NM_202381.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cortical microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SPIRAL1-like2
    NP_177083.1
    • SPIRAL1-like2 (SP1L2); BEST Arabidopsis thaliana protein match is: SPIRAL1-like1 (TAIR:AT1G26355.1); Has 157 Blast hits to 132 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
    NP_974110.1
    • SPIRAL1-like2 (SP1L2); BEST Arabidopsis thaliana protein match is: SPIRAL1-like1 (TAIR:AT1G26355.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26026253..26027771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105590.3 → NP_177083.1  SPIRAL1-like2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177083.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBS7, Q9LE54
      UniProtKB/TrEMBL
      A0A178WC94, A0A5S9WTB4

    2. NM_202381.2 → NP_974110.1  SPIRAL1-like2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974110.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBS7, Q9LE54
      UniProtKB/TrEMBL
      A0A178WC94, A0A5S9WTB4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LE54.1

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