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    Prolyl oligopeptidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843234, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Prolyl oligopeptidase family protein
    Primary source
    TAIR:AT1G69020
    Locus tag
    AT1G69020
    See related
    Araport:AT1G69020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6L1.20; T6L1_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (25943886..25947211, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene male gametophyte defective 3 Neighboring gene tRNA-Met Neighboring gene BES1-interacting Myc-like protein 2 Neighboring gene BSD domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105573.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Prolyl oligopeptidase family protein
    NP_177065.2
    • Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1); Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51; Bacteria - 2817; Metazoa - 295; Fungi - 25; Plants - 196; Viruses - 0; Other Eukaryotes - 3319 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25943886..25947211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334396.1 → NP_001323142.1  Prolyl oligopeptidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AW81, Q9CAA3

    2. NM_105573.2 → NP_177065.2  Prolyl oligopeptidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177065.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ESH4, F4I0I5
      Conserved Domains (2) summary
      COG1770
      Location:39 → 752
      PtrB; Protease II [Amino acid transport and metabolism]
      pfam00326
      Location:537 → 754
      Peptidase_S9; Prolyl oligopeptidase family
    Nucleotide Protein
    Heading Accession and Version

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