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    intracellular protein transporter [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819659, updated on 18-Sep-2024

    Summary

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    Official Full Name
    intracellular protein transporter
    Primary source
    TAIR:AT3G04990
    Locus tag
    AT3G04990
    See related
    Araport:AT3G04990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J14.6; T9J14_6
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (1383953..1384679, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene trichohyalin, putative (DUF3444) Neighboring gene DHHC-type zinc finger family protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene Transport protein particle (TRAPP) component Neighboring gene ncRNA Neighboring gene Protein of unknown function, transmembrane-40

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    intracellular protein transporter
    NP_187150.1
    • BEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560 proteins in 1427 species: Archae - 757; Bacteria - 4112; Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71; Other Eukaryotes - 8080 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1383953..1384679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111371.2 → NP_187150.1  intracellular protein transporter [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187150.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBA7, A0A384KCN4, A0A654F9G6, Q9CAW3
      Conserved Domains (1) summary
      COG1196
      Location:30 → 198
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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