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    ATG8H Ubiquitin-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819816, updated on 18-Sep-2024

    Summary

    Official Symbol
    ATG8H
    Official Full Name
    Ubiquitin-like superfamily protein
    Primary source
    TAIR:AT3G06420
    Locus tag
    AT3G06420
    See related
    Araport:AT3G06420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    autophagy 8h; F24P17.11; F24P17_11
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    Genomic context

    See ATG8H in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (1954990..1956397, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene miscRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene miscRNA Neighboring gene miscRNA

    General protein information

    Preferred Names
    Ubiquitin-like superfamily protein
    NP_566283.1
    • autophagy 8h (ATG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G15580.1); Has 1476 Blast hits to 1474 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 178; Plants - 301; Viruses - 3; Other Eukaryotes - 272 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1954990..1956397 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111517.3NP_566283.1  Ubiquitin-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566283.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8S925, Q9SQU5
      UniProtKB/TrEMBL
      A0A5S9X9N9, A0A654F624
      Conserved Domains (1) summary
      pfam02991
      Location:16119
      Atg8; Autophagy protein Atg8 ubiquitin like