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    Acid phosphatase/vanadium-dependent haloperoxidase-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821715, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    Primary source
    TAIR:AT3G21610
    Locus tag
    AT3G21610
    See related
    Araport:AT3G21610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (7608942..7610803, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene chitin elicitor receptor kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001035664.1
    NM_113056.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    NP_001030741.1
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_188798.2
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1115 Blast hits to 1115 proteins in 408 species: Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7608942..7610803 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113056.3 → NP_188798.2  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188798.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFW7, A0A654FES3, Q8L7M6
      Conserved Domains (1) summary
      pfam02681
      Location:38 → 165
      DUF212; Divergent PAP2 family

    2. NM_001035664.1 → NP_001030741.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030741.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IXN1
      Conserved Domains (1) summary
      pfam02681
      Location:4 → 113
      DUF212; Divergent PAP2 family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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