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    Ribosomal protein S5/Elongation factor G/III/V family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821872, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein S5/Elongation factor G/III/V family protein
    Primary source
    TAIR:AT3G22980
    Locus tag
    AT3G22980
    See related
    Araport:AT3G22980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (8160075..8163788, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF506) Neighboring gene ncRNA Neighboring gene ARM repeat superfamily protein Neighboring gene CBL-interacting protein kinase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001338606.1
    NM_001338607.1
    NM_113198.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein S5/Elongation factor G/III/V family protein
    NP_001319621.1
    • Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8160075..8163788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338606.1 → NP_001319621.1  Ribosomal protein S5/Elongation factor G/III/V family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F9U8, A0A7G2ENK8, F4J2T9
      Conserved Domains (1) summary
      cl30786
      Location:1 → 998
      FusA; Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]

    2. NM_001338607.1 → NP_001327177.1  Ribosomal protein S5/Elongation factor G/III/V family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F9U8, A0A7G2ENK8, F4J2T9
      Conserved Domains (1) summary
      cl30786
      Location:1 → 998
      FusA; Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]

    3. NM_113198.3 → NP_188938.1  Ribosomal protein S5/Elongation factor G/III/V family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188938.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F9U8, A0A7G2ENK8, F4J2T9
      Conserved Domains (1) summary
      cl30786
      Location:1 → 998
      FusA; Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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