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    RLP39 receptor like protein 39 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822088, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP39
    Official Full Name
    receptor like protein 39
    Primary source
    TAIR:AT3G24900
    Locus tag
    AT3G24900
    See related
    Araport:AT3G24900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP39; receptor like protein 39
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    Genomic context

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    See RLP39 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (9099060..9101991, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Helicase/SANT-associated, DNA binding protein Neighboring gene ncRNA Neighboring gene Helicase/SANT-associated, DNA binding protein Neighboring gene vesicle-associated membrane protein 728 Neighboring gene ncRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 39
    NP_189134.1
    • receptor like protein 39 (RLP39); INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 41 (TAIR:AT3G25010.1); Has 100467 Blast hits to 28160 proteins in 1059 species: Archae - 45; Bacteria - 6030; Metazoa - 21147; Fungi - 1159; Plants - 64382; Viruses - 14; Other Eukaryotes - 7690 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9099060..9101991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338723.1 → NP_001327089.1  receptor like protein 39 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR86

    2. NM_113402.1 → NP_189134.1  receptor like protein 39 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189134.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J7T6, Q9LRX1
      Conserved Domains (2) summary
      sd00033
      Location:101 → 125
      LRR_RI; leucine-rich repeat [structural motif]
      cl26793
      Location:150 → 812
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4J7T6.1

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