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    MS2 Jojoba acyl CoA reductase-related male sterility protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820372, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MS2
    Official Full Name
    Jojoba acyl CoA reductase-related male sterility protein
    Primary source
    TAIR:AT3G11980
    Locus tag
    AT3G11980
    See related
    Araport:AT3G11980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FAR2; FATTY ACID REDUCTASE 2; MALE STERILITY 2; MALE STERILITY PROTEIN 2; MEC18.1
    Summary
    Similar to fatty acid reductases.
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    Genomic context

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    See MS2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (3814231..3817117)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RIBOSOMAL RNA PROCESSING 5 Neighboring gene pseudo Neighboring gene ECA1 gametogenesis family protein (DUF784) Neighboring gene S-locus related protein SLR1, putative (S1)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biochemical characteristics of AtFAR2, a fatty acid reductase from Arabidopsis thaliana that reduces fatty acyl-CoA and -ACP substrates into fatty alcohols. Doan TT, et al. Acta Biochim Pol, 2016. PMID 27274541
    2. Trace concentrations of imazethapyr (IM) affect floral organs development and reproduction in Arabidopsis thaliana: IM-induced inhibition of key genes regulating anther and pollen biosynthesis. Qian H, et al. Ecotoxicology, 2015 Jan. PMID 25348600
    3. Male Sterile2 encodes a plastid-localized fatty acyl carrier protein reductase required for pollen exine development in Arabidopsis. Chen W, et al. Plant Physiol, 2011 Oct. PMID 21813653, Free PMC Article
    4. Functional expression of five Arabidopsis fatty acyl-CoA reductase genes in Escherichia coli. Doan TT, et al. J Plant Physiol, 2009 May 15. PMID 19062129
    5. A large-scale genetic screen in Arabidopsis to identify genes involved in pollen exine production. Dobritsa AA, et al. Plant Physiol, 2011 Oct. PMID 21849515, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. although AtFAR2 is the major enzyme responsible for exine layer functionality, AtFAR6 might provide functional redundancy to AtFAR2.
      Title: Biochemical characteristics of AtFAR2, a fatty acid reductase from Arabidopsis thaliana that reduces fatty acyl-CoA and -ACP substrates into fatty alcohols.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_112032.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alcohol-forming long-chain fatty acyl-CoA reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty alcohol biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within microsporogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen exine formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen exine formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to herbicide IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Jojoba acyl CoA reductase-related male sterility protein
    NP_187805.1
    • MALE STERILITY 2 (MS2); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 2390 Blast hits to 2358 proteins in 427 species: Archae - 4; Bacteria - 606; Metazoa - 985; Fungi - 290; Plants - 282; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3814231..3817117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112032.3 → NP_187805.1  Jojoba acyl CoA reductase-related male sterility protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187805.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9TSP6, Q08891, Q9LHM3
      UniProtKB/TrEMBL
      A0A178VDD9, A0A5S9XBV7, A0A654FBJ1
      Conserved Domains (1) summary
      PLN02503
      Location:1 → 616
      PLN02503; fatty acyl-CoA reductase 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08891.2

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