U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SWEET6 Nodulin MtN3 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842995, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SWEET6
    Official Full Name
    Nodulin MtN3 family protein
    Primary source
    TAIR:AT1G66770
    Locus tag
    AT1G66770
    See related
    Araport:AT1G66770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtSWEET6; F4N21.10; F4N21_10
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SWEET6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (24906451..24907236, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CDK-activating kinase 4 Neighboring gene MATE efflux family protein Neighboring gene MATE efflux family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional role of oligomerization for bacterial and plant SWEET sugar transporter family. Xuan YH, et al. Proc Natl Acad Sci U S A, 2013 Sep 24. PMID 24027245, Free PMC Article
    2. Sugar transporters for intercellular exchange and nutrition of pathogens. Chen LQ, et al. Nature, 2010 Nov 25. PMID 21107422, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables sugar transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein homooligomerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Nodulin MtN3 family protein
    NP_176849.1
    • Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT4G10850.1); Has 928 Blast hits to 913 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 0; Plants - 632; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24906451..24907236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105348.1 → NP_176849.1  Nodulin MtN3 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176849.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9M9
      UniProtKB/TrEMBL
      A0A5S9WSC3
      Conserved Domains (2) summary
      pfam03083
      Location:137 → 221
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:11 → 99
      PQ-loop; PQ loop repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9M9.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools