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    DER2.2 DERLIN-2.2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825823, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DER2.2
    Official Full Name
    DERLIN-2.2
    Primary source
    TAIR:AT4G04860
    Locus tag
    AT4G04860
    See related
    Araport:AT4G04860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DERLIN-2.2; T4B21.2; T4B21_2
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    Genomic context

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    See DER2.2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (2459853..2461739)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene K+ efflux antiporter 3 Neighboring gene ncRNA Neighboring gene cardiolipin synthase Neighboring gene adenosine/AMP deaminase family protein Neighboring gene PCF11P-similar protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_116724.4

    General protein information

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    Preferred Names
    DERLIN-2.2
    NP_192395.1
    • DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2459853..2461739
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116724.4 → NP_192395.1  DERLIN-2.2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192395.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZS88
      UniProtKB/TrEMBL
      A0A178UZK9, A0A5S9XQ53, A0A7G2EXF1
      Conserved Domains (1) summary
      cl21536
      Location:12 → 212
      Rhomboid; Rhomboid family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZS88.1

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