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    VIIIB P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828845, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VIIIB
    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT4G27370
    Locus tag
    AT4G27370
    See related
    Araport:AT4G27370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATVIIIB; F27G19.14; MYOSIN VIII B
    Summary
    member of Myosin-like proteins
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    Genomic context

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    See VIIIB in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    25
    Sequence:
    Chromosome: 4; NC_003075.7 (13694689..13701119, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene membrane lipoprotein lipid attachment site-like protein, putative (DUF1223) Neighboring gene Dynein light chain type 1 family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Phe

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence. Reddy AS, et al. Genome Biol, 2001. PMID 11516337, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_118871.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cytoskeletal motor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within actin filament-based movement TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_194467.5
    • VIIIB; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: chloroplast, myosin complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G54280.2); Has 7343 Blast hits to 6663 proteins in 755 species: Archae - 3; Bacteria - 49; Metazoa - 4831; Fungi - 770; Plants - 447; Viruses - 2; Other Eukaryotes - 1241 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13694689..13701119 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341848.1 → NP_001328308.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWA6, A0A1P8B4A4

    2. NM_001341849.1 → NP_001328309.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWA6, A0A1P8B4A4

    3. NM_001341850.1 → NP_001328307.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4C4, A0A654FTQ3

    4. NM_118871.6 → NP_194467.5  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194467.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JIU4, O81840, Q9M0J7
      UniProtKB/TrEMBL
      A0A654FTQ3
      Conserved Domains (2) summary
      smart00242
      Location:159 → 828
      MYSc; Myosin. Large ATPases
      cd01383
      Location:178 → 818
      MYSc_Myo8; class VIII myosin, motor domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JIU4.1

    Gene LinkOut

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