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    metallo-beta-lactamase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829493, updated on 18-Sep-2024

    Summary

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    Official Full Name
    metallo-beta-lactamase family protein
    Primary source
    TAIR:AT4G33540
    Locus tag
    AT4G33540
    See related
    Araport:AT4G33540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16L1.30; T16L1_30
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (16130593..16133969)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Protein phosphatase 2C family protein Neighboring gene 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase Neighboring gene P-type ATP-ase 1 Neighboring gene K+ uptake permease 5 Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene Wound-responsive family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A mutant of the Arabidopsis phosphate transporter PHT1;1 displays enhanced arsenic accumulation. Catarecha P, et al. Plant Cell, 2007 Mar. PMID 17400898, Free PMC Article
    2. A split-ubiquitin yeast two-hybrid screen to examine the substrate specificity of atToc159 and atToc132, two Arabidopsis chloroplast preprotein import receptors. Dutta S, et al. PLoS One, 2014. PMID 24736607, Free PMC Article
    3. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001342220.1
    NM_001342221.1
    NM_119509.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to arsenic-containing substance IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    metallo-beta-lactamase family protein
    NP_195080.2
    • metallo-beta-lactamase family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: response to arsenic, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 1592 Blast hits to 1592 proteins in 436 species: Archae - 145; Bacteria - 835; Metazoa - 30; Fungi - 10; Plants - 78; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16130593..16133969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119509.5 → NP_195080.2  metallo-beta-lactamase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195080.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XYR1, A0A654FV52, Q8RWE1
      Conserved Domains (2) summary
      cd07727
      Location:147 → 324
      YmaE-like_MBL-fold; uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain
      pfam13370
      Location:68 → 122
      Fer4_13; 4Fe-4S single cluster domain of Ferredoxin I

    2. NM_001342220.1 → NP_001328731.1  metallo-beta-lactamase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XYR1, A0A654FV52, Q8RWE1
      Conserved Domains (2) summary
      cd07727
      Location:147 → 324
      YmaE-like_MBL-fold; uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain
      pfam13370
      Location:68 → 122
      Fer4_13; 4Fe-4S single cluster domain of Ferredoxin I

    3. NM_001342221.1 → NP_001328732.1  metallo-beta-lactamase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1X6, A0A1P8B5I6, A0A384KYF4
      Conserved Domains (2) summary
      cd07727
      Location:56 → 233
      YmaE-like_MBL-fold; uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain
      pfam13370
      Location:1 → 31
      Fer4_13; 4Fe-4S single cluster domain of Ferredoxin I
    Nucleotide Protein
    Heading Accession and Version

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