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    phosphatidate cytidylyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823639, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phosphatidate cytidylyltransferase family protein
    Primary source
    TAIR:AT3G45040
    Locus tag
    AT3G45040
    See related
    Araport:AT3G45040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtDOK1; DOK1; dolichol kinase 1
    Summary
    Encodes a putative dolichol kinase.
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (16472538..16475830, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase-like 48 Neighboring gene Ribosomal L18p/L5e family protein Neighboring gene Ribosomal protein S10p/S20e family protein Neighboring gene uncharacterized protein Neighboring gene high affinity nitrate transporter 2.6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TURAN and EVAN mediate pollen tube reception in Arabidopsis Synergids through protein glycosylation. Lindner H, et al. PLoS Biol, 2015 Apr. PMID 25919390, Free PMC Article
    2. The Arabidopsis vitamin E pathway gene5-1 mutant reveals a critical role for phytol kinase in seed tocopherol biosynthesis. Valentin HE, et al. Plant Cell, 2006 Jan. PMID 16361393, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_001339189.1
    NM_001339190.1
    NM_114373.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables dolichol kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables dolichol kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pollen development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube reception IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein glycosylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidate cytidylyltransferase family protein
    NP_190090.2
    • phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, dolichol kinase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 410 Blast hits to 408 proteins in 217 species: Archae - 14; Bacteria - 44; Metazoa - 111; Fungi - 131; Plants - 43; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16472538..16475830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114373.4 → NP_190090.2  phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190090.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J4C8, Q8VXX8, Q9LXH2
      UniProtKB/TrEMBL
      A0A178VLG6, A0A5S9XIR6
      Conserved Domains (1) summary
      cl21502
      Location:364 → 562
      CTP_transf_1; Cytidylyltransferase family

    2. NM_001339189.1 → NP_001325870.1  phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMJ1
      Conserved Domains (1) summary
      cl21502
      Location:364 → 490
      CTP_transf_1; Cytidylyltransferase family

    3. NM_001339190.1 → NP_001325871.1  phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMJ2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4J4C8.1

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