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    Plant calmodulin-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824622, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant calmodulin-binding protein-like protein
    Primary source
    TAIR:AT3G54570
    Locus tag
    AT3G54570
    See related
    Araport:AT3G54570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (20197949..20199202, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506) Neighboring gene histone H2A 11 Neighboring gene Proline-rich extensin-like family protein Neighboring gene hydroxyproline-rich glycoprotein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115314.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Plant calmodulin-binding protein-like protein
    NP_191020.1
    • Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT2G38800.1); Has 207 Blast hits to 162 proteins in 51 species: Archae - 0; Bacteria - 22; Metazoa - 7; Fungi - 9; Plants - 118; Viruses - 7; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20197949..20199202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115314.1 → NP_191020.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191020.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VMY9, A0A654FHX3, Q9M1H1
      Conserved Domains (1) summary
      smart01054
      Location:297 → 416
      CaM_binding; Plant calmodulin-binding domain
    Nucleotide Protein
    Heading Accession and Version

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