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    PLP9 PATATIN-like protein 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825495, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PLP9
    Official Full Name
    PATATIN-like protein 9
    Primary source
    TAIR:AT3G63200
    Locus tag
    AT3G63200
    See related
    Araport:AT3G63200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PATATIN-like protein 9; PLA IIIB
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    Genomic context

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    See PLP9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (23345754..23347672)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene TIC-like protein Neighboring gene ribosome recycling factor, chloroplast precursor Neighboring gene ncRNA Neighboring gene mediator of aba-regulated dormancy protein (DUF581) Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Patatin-related phospholipase pPLAIIIδ influences auxin-responsive cell morphology and organ size in Arabidopsis and Brassica napus. Dong Y, et al. BMC Plant Biol, 2014 Nov 27. PMID 25428555, Free PMC Article
    2. Proteomic insight into reduced cell elongation resulting from overexpression of patatin-related phospholipase pPLAIIIδ in Arabidopsis thaliana. Zheng Y, et al. Plant Signal Behav, 2014. PMID 24705037, Free PMC Article
    3. Patatin-related phospholipase pPLAIIIδ increases seed oil content with long-chain fatty acids in Arabidopsis. Li M, et al. Plant Physiol, 2013 May. PMID 23542150, Free PMC Article
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The data suggest that the PLAIIIdelta gene plays an important role in cell morphology and organ size through its involvement in the regulation of auxin distribution in Arabidopsis and Brassica napus.
      Title: Patatin-related phospholipase pPLAIIIδ influences auxin-responsive cell morphology and organ size in Arabidopsis and Brassica napus.
    2. may regulate cytoskeletal dynamics leading to retardation in anisotropic growth
      Title: Proteomic insight into reduced cell elongation resulting from overexpression of patatin-related phospholipase pPLAIIIδ in Arabidopsis thaliana.
    3. The pPLAIIIdelta-mediated phospholipid turnover plays a role in fatty acid remodeling and glycerolipid production.
      Title: Patatin-related phospholipase pPLAIIIδ increases seed oil content with long-chain fatty acids in Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_116185.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    PATATIN-like protein 9
    NP_567142.1
    • PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23345754..23347672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116185.2 → NP_567142.1  PATATIN-like protein 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567142.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZQ3, Q9M1W9
      UniProtKB/TrEMBL
      A0A178V8V3
      Conserved Domains (1) summary
      cd07199
      Location:32 → 334
      Pat17_PNPLA8_PNPLA9_like; Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93ZQ3.1

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