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    aldose 1-epimerase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831301, updated on 18-Sep-2024

    Summary

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    Official Full Name
    aldose 1-epimerase family protein
    Primary source
    TAIR:AT5G14500
    Locus tag
    AT5G14500
    See related
    Araport:AT5G14500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T15N1.5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (4674213..4676872, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 85 Neighboring gene tRNA-Asp Neighboring gene ARM repeat superfamily protein Neighboring gene uncharacterized protein Neighboring gene pescadillo-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343341.1
    NM_121454.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucose-6-phosphate 1-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    aldose 1-epimerase family protein
    NP_568301.1
    • aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4674213..4676872 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121454.3 → NP_568301.1  aldose 1-epimerase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568301.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNA1, Q5EAF4, Q84W23
      Conserved Domains (1) summary
      cd09020
      Location:14 → 285
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

    2. NM_001343341.1 → NP_001331998.1  aldose 1-epimerase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BFM5, Q84W23
    Nucleotide Protein
    Heading Accession and Version

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