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    DNAJ heat shock N-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831993, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNAJ heat shock N-terminal domain-containing protein
    Primary source
    TAIR:AT5G18750
    Locus tag
    AT5G18750
    See related
    Araport:AT5G18750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17K4.2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (6254574..6258093)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNAJ heat shock amino-terminal domain protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein (DUF3444) Neighboring gene uncharacterized protein Neighboring gene tRNA-Pro Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121880.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNAJ heat shock N-terminal domain-containing protein
    NP_197376.1
    • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G06340.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6254574..6258093
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121880.4 → NP_197376.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197376.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U968, A0A5S9Y5C8, Q3E9D9
      Conserved Domains (2) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain
      pfam11926
      Location:392 → 605
      DUF3444; Domain of unknown function (DUF3444)
    Nucleotide Protein
    Heading Accession and Version

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