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    hypothetical protein (DUF630 and DUF632) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835536, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF630 and DUF632)
    Primary source
    TAIR:AT5G54480
    Locus tag
    AT5G54480
    See related
    Araport:AT5G54480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24B18.10; F24B18_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (22118004..22120166)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene wound-responsive protein-like protein Neighboring gene B-box type zinc finger family protein Neighboring gene ncRNA Neighboring gene pinoid-binding protein 1 Neighboring gene flavodoxin-like quinone reductase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124828.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF630 and DUF632)
    NP_200259.1
    • Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G21740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22118004..22120166
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124828.1 → NP_200259.1  hypothetical protein (DUF630 and DUF632) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200259.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UH54, A0A7G2FKL0, Q9LSQ7
      Conserved Domains (2) summary
      pfam04782
      Location:329 → 606
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 60
      DUF630; Protein of unknown function (DUF630)
    Nucleotide Protein
    Heading Accession and Version

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