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    ATK3 kinesin 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835556, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATK3
    Official Full Name
    kinesin 3
    Primary source
    TAIR:AT5G54670
    Locus tag
    AT5G54670
    See related
    Araport:AT5G54670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    KATC; kinesin 3; KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C; MRB17.18
    Summary
    Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.
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    Genomic context

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    See ATK3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    17
    Sequence:
    Chromosome: 5; NC_003076.8 (22209403..22214252)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene galacturonosyltransferase 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and characterization of the kinesin-related genes katB and katC of Arabidopsis thaliana. Mitsui H, et al. Plant Mol Biol, 1994 Aug. PMID 8075402
    2. Two kinesins from Arabidopsis, KatB and KatC, have a second microtubule-binding site in the tail domain. Jiang S, et al. J Biochem Mol Biol, 2007 Jan 31. PMID 17244481
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The microtubule-binding site at the tail domain of KatB or KatC can induce microtubules bundling only when the stalk domain is present.
      Title: Two kinesins from Arabidopsis, KatB and KatC, have a second microtubule-binding site in the tail domain.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001345094.1
    NM_001345095.1
    NM_124848.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables microtubule binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    kinesin 3
    NP_568811.1
    • kinesin 3 (ATK3); FUNCTIONS IN: microtubule binding, microtubule motor activity, ATPase activity; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 2 (TAIR:AT4G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22209403..22214252
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124848.3 → NP_568811.1  kinesin 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568811.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46875, Q0WS04, Q9FH38
      UniProtKB/TrEMBL
      A0A178UTF4, A0A5S9YE97, A0A7G2FI40
      Conserved Domains (2) summary
      COG1196
      Location:46 → 341
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01366
      Location:394 → 735
      KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

    2. NM_001345094.1 → NP_001330580.1  kinesin 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46875, Q0WS04, Q9FH38
      UniProtKB/TrEMBL
      A0A178UTF4, A0A5S9YE97, A0A7G2FI40
      Conserved Domains (2) summary
      COG1196
      Location:46 → 341
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01366
      Location:394 → 735
      KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

    3. NM_001345095.1 → NP_001330581.1  kinesin 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BB82, A0A7G2FI40
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P46875.1

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