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    ASG1 nuclear factor 1 A-type protein (DUF1005) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831630, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ASG1
    Official Full Name
    nuclear factor 1 A-type protein (DUF1005)
    Primary source
    TAIR:AT5G17640
    Locus tag
    AT5G17640
    See related
    Araport:AT5G17640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Abiotic Stress Gene 1; K10A8.120; K10A8_120
    Summary
    Expression of this gene is induced by abscisic acid and salt stress.
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    Genomic context

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    See ASG1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (5810935..5813316, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclear matrix protein Neighboring gene Nucleotide/sugar transporter family protein Neighboring gene ncRNA Neighboring gene glycine/proline-rich protein Neighboring gene tRNA (guanine-N-7) methyltransferase Neighboring gene alpha/beta-Hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Asg1 is a stress-inducible gene which increases stomatal resistance in salt stressed potato. Batelli G, et al. J Plant Physiol, 2012 Dec 15. PMID 22854180, Free PMC Article
    2. The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes. Singh R, et al. Front Plant Sci, 2020. PMID 32194606, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_121770.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    nuclear factor 1 A-type protein (DUF1005)
    NP_197266.1
    • Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5810935..5813316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121770.4 → NP_197266.1  nuclear factor 1 A-type protein (DUF1005) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197266.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8X6, A0A5S9Y5L1, Q9LF60
      Conserved Domains (1) summary
      pfam06219
      Location:1 → 418
      DUF1005; Protein of unknown function (DUF1005)
    Nucleotide Protein
    Heading Accession and Version

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