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    AAA-type ATPase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829810, updated on 18-Sep-2024

    Summary

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    Official Full Name
    AAA-type ATPase family protein
    Primary source
    TAIR:AT4G36580
    Locus tag
    AT4G36580
    See related
    Araport:AT4G36580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.32; AP22_32
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (17257760..17260855)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene RAD-like 3 Neighboring gene MADS-box transcription factor family protein Neighboring gene Late embryogenesis abundant (LEA) protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. mTERF18 and ATAD3 are required for mitochondrial nucleoid structure and their disruption confers heat tolerance in Arabidopsis thaliana. Kim M, et al. New Phytol, 2021 Dec. PMID 34482561
    2. Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. Tan YF, et al. Plant Physiol, 2010 Feb. PMID 20018591, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119821.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables zinc ion binding HDA PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    AAA-type ATPase family protein
    NP_195376.2
    • AAA-type ATPase family protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G18330.1); Has 33237 Blast hits to 29448 proteins in 3004 species: Archae - 1414; Bacteria - 11083; Metazoa - 6547; Fungi - 3972; Plants - 2549; Viruses - 53; Other Eukaryotes - 7619 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17257760..17260855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119821.4 → NP_195376.2  AAA-type ATPase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195376.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FW42, F4JQE9
      Conserved Domains (3) summary
      smart00382
      Location:381 → 513
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:385 → 512
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam12037
      Location:51 → 317
      DUF3523; Domain of unknown function (DUF3523)
    Nucleotide Protein
    Heading Accession and Version

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