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    Zinc-finger domain of monoamine-oxidase A repressor R1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829865, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Zinc-finger domain of monoamine-oxidase A repressor R1
    Primary source
    TAIR:AT4G37110
    Locus tag
    AT4G37110
    See related
    Araport:AT4G37110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.72; AP22_72
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (17484030..17486400, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Pre-mRNA splicing Prp18-interacting factor Neighboring gene hydroxyproline-rich glycoprotein family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001342431.1
    NM_001342432.1
    NM_119874.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Zinc-finger domain of monoamine-oxidase A repressor R1
    NP_195428.3
    • Zinc-finger domain of monoamine-oxidase A repressor R1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT2G23530.1); Has 452 Blast hits to 447 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 54; Plants - 229; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17484030..17486400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342430.1 → NP_001329782.1  Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8S1, A0A654FW85

    2. NM_119874.5 → NP_195428.3  Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195428.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0R2, A0A7G2F6N5, Q0WPT6
      Conserved Domains (1) summary
      pfam10497
      Location:179 → 272
      zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1

    3. NM_001342432.1 → NP_001329783.1  Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8T9
      Conserved Domains (1) summary
      pfam10497
      Location:84 → 177
      zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1

    4. NM_001342431.1 → NP_001329784.1  Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8T9
      Conserved Domains (1) summary
      pfam10497
      Location:84 → 177
      zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1
    Nucleotide Protein
    Heading Accession and Version

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