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    initiation factor 4A-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829856, updated on 18-Sep-2024

    Summary

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    Official Full Name
    initiation factor 4A-like protein
    Primary source
    TAIR:AT4G37020
    Locus tag
    AT4G37020
    See related
    Araport:AT4G37020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (17445621..17447455)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene heat shock factor 4 Neighboring gene accelerated cell death 2 (ACD2) Neighboring gene centrin 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001204012.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    initiation factor 4A-like protein
    NP_001190941.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1).
    NP_568013.1
    • BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17445621..17447455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119865.4 → NP_568013.1  initiation factor 4A-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568013.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1F0, A0A7G2F6H8, Q9FPI7
      Conserved Domains (1) summary
      PTZ00424
      Location:23 → 212
      PTZ00424; helicase 45; Provisional

    2. NM_001204012.2 → NP_001190941.1  initiation factor 4A-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190941.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0C1, F4JR84, O23183
      Conserved Domains (1) summary
      PTZ00424
      Location:23 → 208
      PTZ00424; helicase 45; Provisional
    Nucleotide Protein
    Heading Accession and Version

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