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    ARM repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827347, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ARM repeat superfamily protein
    Primary source
    TAIR:AT4G16490
    Locus tag
    AT4G16490
    See related
    Araport:AT4G16490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL4270C; FCAALL.59
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (9293543..9296089, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene inositol transporter 4 Neighboring gene Cystatin/monellin superfamily protein Neighboring gene YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein Neighboring gene root meristem growth factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Feronia-interacting proteins in Arabidopsis thaliana. Choi JH, et al. Genes Genomics, 2022 Dec. PMID 36053485
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_117747.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARM repeat superfamily protein
    NP_567501.4
    • ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01400.1); Has 4881 Blast hits to 3043 proteins in 255 species: Archae - 2; Bacteria - 6; Metazoa - 869; Fungi - 533; Plants - 2917; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9293543..9296089 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117747.7 → NP_567501.4  ARM repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567501.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXC7, F4JMH0, Q8GWN8
      Conserved Domains (2) summary
      PLN03200
      Location:183 → 416
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00043
      Location:218 → 254
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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