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    B12D protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822700, updated on 18-Sep-2024

    Summary

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    Official Full Name
    B12D protein
    Primary source
    TAIR:AT3G29970
    Locus tag
    AT3G29970
    See related
    Araport:AT3G29970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (11745197..11746570)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene F-box/RNI-like superfamily protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001339042.1
    NM_113912.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    B12D protein
    NP_189632.1
    • B12D protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G48140.1); Has 139 Blast hits to 139 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11745197..11746570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339041.1 → NP_001327220.1  B12D protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHP6, A0A1I9LRM7, A0A5S9XGX4

    2. NM_113912.4 → NP_189632.1  B12D protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189632.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VFW1, Q9LJ47
      Conserved Domains (1) summary
      pfam06522
      Location:5 → 73
      B12D; NADH-ubiquinone reductase complex 1 MLRQ subunit

    3. NM_001339042.1 → NP_001327219.1  B12D protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHP6, A0A1I9LRM7, A0A5S9XGX4
    Nucleotide Protein
    Heading Accession and Version

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