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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816859, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT2G23270
    Locus tag
    AT2G23270
    See related
    Araport:AT2G23270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20D16.10; T20D16_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (9903215..9903845)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 84B2 Neighboring gene UDP-glucosyl transferase 84B1 Neighboring gene myb domain protein 70 Neighboring gene Leucine-rich repeat protein kinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PAMP-INDUCED SECRETED PEPTIDE 3 modulates immunity in Arabidopsis. Najafi J, et al. J Exp Bot, 2020 Jan 23. PMID 31665431
    2. The AP2/ERF transcription factor AtERF73/HRE1 modulates ethylene responses during hypoxia in Arabidopsis. Yang CY, et al. Plant Physiol, 2011 May. PMID 21398256, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PAMP-INDUCED SECRETED PEPTIDE 3 modulates immunity in Arabidopsis.
      Title: PAMP-INDUCED SECRETED PEPTIDE 3 modulates immunity in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_127891.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within defense response to other organism IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of developmental process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_565549.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, root, stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9903215..9903845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127891.1 → NP_565549.1  uncharacterized protein AT2G23270 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565549.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VZN1, A0A654F656, O22181
    Nucleotide Protein
    Heading Accession and Version

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