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    CG13606 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42873, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13606provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039161
    Locus tag
    Dmel_CG13606
    See related
    AllianceGenome:FB:FBgn0039161
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13606
    Summary
    Is expressed in dorsal head epidermis; embryonic head epidermis; and larval foregut atrium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13606 in Genome Data Viewer
    Location:
    95E7-95E8; 3-83 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24172628..24184144)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19998350..20009866)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 7 Neighboring gene mitochondrial ribosomal protein S24 Neighboring gene Adenomatous polyposis coli 2 Neighboring gene uncharacterized protein Neighboring gene morgana Neighboring gene uncharacterized protein Neighboring gene Structural maintenance of chromosomes 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Discovery of insect and human dengue virus host factors. Sessions OM, et al. Nature, 2009 Apr 23. PMID 19396146, Free PMC Article
    2. The gut microbiome participates in transgenerational inheritance of low-temperature responses in Drosophila melanogaster. Zare A, et al. FEBS Lett, 2018 Dec. PMID 30372516, Free PMC Article
    3. Spitz from the retina regulates genes transcribed in the second mitotic wave, peripodial epithelium, glia and plasmatocytes of the Drosophila eye imaginal disc. Firth LC, et al. Dev Biol, 2007 Jul 15. PMID 17553483, Free PMC Article
    4. The genetic basis of natural variation in mushroom body size in Drosophila melanogaster. Zwarts L, et al. Nat Commun, 2015 Dec 11. PMID 26656654, Free PMC Article
    5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13606-PA
    CG13606-PB
    CG13606-PC
    CG13606-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24172628..24184144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300569.1 → NP_001287498.1  uncharacterized protein Dmel_CG13606, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287498.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LIJ3

    2. NM_001043285.3 → NP_001036750.1  uncharacterized protein Dmel_CG13606, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036750.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0KI21

    3. NM_142968.3 → NP_651225.1  uncharacterized protein Dmel_CG13606, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651225.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VCC1
      Related
      FBpp0083938

    4. NM_001275971.2 → NP_001262900.1  uncharacterized protein Dmel_CG13606, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262900.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGW5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KGW5 A0A0B4KGW5
    A0A0B4LIJ3 A0A0B4LIJ3
    Q0KI21 Q0KI21
    Q9VCC1 Q9VCC1

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