U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    2310039L15Rik RIKEN cDNA 2310039L15 gene [ Mus musculus (house mouse) ]

    Gene ID: 69629, updated on 10-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    2310039L15Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2310039L15 geneprovided by MGI
    Primary source
    MGI:MGI:1916879
    See related
    Ensembl:ENSMUSG00000100550 AllianceGenome:MGI:1916879
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    G2-3; A53T-syn; PrPsynA53T; Tg(Prnp-SNCA*A53T)23Mkle
    Summary
    Used to study Parkinson's disease 1. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See 2310039L15Rik in Genome Data Viewer
    Location:
    10; 10 C2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (95172138..95199078)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (95336276..95363216)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53600 Neighboring gene predicted gene, 29684 Neighboring gene STARR-positive B cell enhancer mm9_chr10:94613739-94614040 Neighboring gene CASP2 and RIPK1 domain containing adaptor with death domain Neighboring gene STARR-seq mESC enhancer starr_27617 Neighboring gene STARR-positive B cell enhancer mm9_chr10:94720661-94720962 Neighboring gene STARR-positive B cell enhancer mm9_chr10:94723743-94724044 Neighboring gene STARR-seq mESC enhancer starr_27622 Neighboring gene STARR-positive B cell enhancer ABC_E6911 Neighboring gene STARR-seq mESC enhancer starr_27628 Neighboring gene STARR-seq mESC enhancer starr_27629 Neighboring gene STARR-seq mESC enhancer starr_27631 Neighboring gene STARR-positive B cell enhancer ABC_E3909 Neighboring gene STARR-positive B cell enhancer mm9_chr10:94834542-94834843 Neighboring gene STARR-seq mESC enhancer starr_27632 Neighboring gene STARR-positive B cell enhancer ABC_E5173 Neighboring gene RIKEN cDNA 5730420D15 gene Neighboring gene suppressor of cytokine signaling 2 Neighboring gene STARR-seq mESC enhancer starr_27634 Neighboring gene predicted gene, 33230

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Differential regulation of small heat shock proteins in transgenic mouse models of neurodegenerative diseases. Wang J, et al. Neurobiol Aging, 2008 Apr. PMID 17316906, Free PMC Article
    2. Alcohol Dehydrogenase 1B Suppresses β-Amyloid-Induced Neuron Apoptosis. Wang Y, et al. Front Aging Neurosci, 2019. PMID 31231206, Free PMC Article
    3. Naturally occurring autoantibodies against α-synuclein rescues memory and motor deficits and attenuates α-synuclein pathology in mouse model of Parkinson's disease. Huang YR, et al. Neurobiol Dis, 2019 Apr. PMID 30481547
    4. ScFv-conjugated superparamagnetic iron oxide nanoparticles for MRI-based diagnosis in transgenic mouse models of Parkinson's and Huntington's diseases. Liu XG, et al. Brain Res, 2019 Mar 15. PMID 30481502
    5. Chicago sky blue 6B inhibits α-synuclein aggregation and propagation. Min JO, et al. Mol Brain, 2022 Mar 28. PMID 35346306, Free PMC Article

    See all (60) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

    Go to the top of the page Help

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Go to the top of the page Help

    Markers

    Other Names

    • Hualpha-Syn(A53T)
    • MoPrP-Hualpha-Syn(A53T)
    • Tg(Prnp-SNCA*A53T)23Dpr

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045337.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC167222, AK009705
      Related
      ENSMUST00000301636.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      95172138..95199078
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.