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    onecut onecut [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 45816, updated on 17-Dec-2024

    Summary

    Official Symbol
    onecutprovided by FlyBase
    Official Full Name
    onecutprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028996
    Locus tag
    Dmel_CG1922
    See related
    AllianceGenome:FB:FBgn0028996
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    A1; CG1922; Dmel\CG1922; Onecut
    Summary
    Enables DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including ganglia; sense organ; sensory nervous system primordium; sensory neurons; and synaptic neuropil domain. Orthologous to human ONECUT1 (one cut homeobox 1); ONECUT2 (one cut homeobox 2); and ONECUT3 (one cut homeobox 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See onecut in Genome Data Viewer
    Location:
    102D1-102D1; 4-0 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (598555..607649, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (619181..628275, complement)

    Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45199 Neighboring gene Eph receptor tyrosine kinase Neighboring gene maverick

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    mobile_element

    • Loc: c602561-602215 mobile_element_type = transposon:INE-1{}1902
    • Loc: c604832-604600 mobile_element_type = transposon:INE-1{}1903

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    onecut
    Names
    CG1922-PA
    CG1922-PB
    D-onecut
    onecut-PA
    onecut-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004353.4 Reference assembly

      Range
      598555..607649 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272136.1NP_001259065.1  onecut, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259065.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9NJB5, Q9V4E4
      UniProtKB/TrEMBL
      F3YDC6, L0MPQ0
      Conserved Domains (2) summary
      smart00389
      Location:920975
      HOX; Homeodomain
      pfam02376
      Location:756830
      CUT; CUT domain
    2. NM_080103.3NP_524842.2  onecut, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524842.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9NJB5, Q9V4E4
      UniProtKB/TrEMBL
      F3YDC6, L0MPQ0
      Related
      FBpp0088173
      Conserved Domains (2) summary
      smart00389
      Location:920975
      HOX; Homeodomain
      pfam02376
      Location:756830
      CUT; CUT domain