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    CG11279 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39486, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG11279provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036342
    Locus tag
    Dmel_CG11279
    See related
    AllianceGenome:FB:FBgn0036342
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GM21080; Dmel\CG11279
    Orthologs
    all
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    Genomic context

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    See CG11279 in Genome Data Viewer
    Location:
    69F6-69F6; 3-39 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (13046977..13048919)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (13040077..13042019)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal protein S4 Neighboring gene Syntaxin 13 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. tartan underlies the evolution of Drosophila male genital morphology. Hagen JFD, et al. Proc Natl Acad Sci U S A, 2019 Sep 17. PMID 31484761, Free PMC Article
    2. Characterization of gene expression regulated by human OTK18 using Drosophila melanogaster as a model system for innate immunity. Spresser CR, et al. J Genet, 2008 Aug. PMID 18776638
    3. Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species. Hagen JFD, et al. Mol Biol Evol, 2021 Jan 23. PMID 32931587, Free PMC Article
    4. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11279-PA
    CG11279-PB
    CG11279-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      13046977..13048919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300127.1 → NP_001287056.1  uncharacterized protein Dmel_CG11279, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287056.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D5SHL7, Q9VU46
      Conserved Domains (1) summary
      pfam09495
      Location:1 → 77
      DUF2462; Protein of unknown function (DUF2462)

    2. NM_001274866.1 → NP_001261795.1  uncharacterized protein Dmel_CG11279, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261795.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D5SHL7, Q9VU46
      Conserved Domains (1) summary
      pfam09495
      Location:1 → 77
      DUF2462; Protein of unknown function (DUF2462)

    3. NM_140371.2 → NP_648628.1  uncharacterized protein Dmel_CG11279, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648628.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D5SHL7, Q9VU46
      Related
      FBpp0075621
      Conserved Domains (1) summary
      pfam09495
      Location:1 → 77
      DUF2462; Protein of unknown function (DUF2462)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VU46 Q9VU46

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