Cpg1 candidate plasticity gene 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Cpg1provided by RGD
Official Full Name: candidate plasticity gene 1provided by RGD
Primary source: RGD:631343
See related: EnsemblRapid:ENSRNOG00000060278 AllianceGenome:RGD:631343
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Involved in regulation of neuronal synaptic plasticity. [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Brain (RPKM 2.3), Adrenal (RPKM 0.7) and 4 other tissues See more
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Genomic context

Location:: 6q32

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	6	NC_086024.1 (124041902..124053895)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	6	NC_051341.1 (118312220..118324213)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	6	NC_005105.4 (123034304..123046297)

Chromosome 6 - NC_086024.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in regulation of neuronal synaptic plasticity	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: candidate plasticity gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.