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    Hrh2 histamine receptor H2 [ Mus musculus (house mouse) ]

    Gene ID: 15466, updated on 27-Nov-2024

    Summary

    Official Symbol
    Hrh2provided by MGI
    Official Full Name
    histamine receptor H2provided by MGI
    Primary source
    MGI:MGI:108482
    See related
    Ensembl:ENSMUSG00000034987 AllianceGenome:MGI:108482
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H2R; HH2R
    Summary
    Predicted to enable heterocyclic compound binding activity; histamine receptor activity; and neurotransmitter receptor activity. Acts upstream of or within several processes, including epithelial cell morphogenesis; gastric acid secretion; and learning or memory. Predicted to be active in dendrite and plasma membrane. Is expressed in brain; early conceptus; stomach; and uterus. Orthologous to human HRH2 (histamine receptor H2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in frontal lobe adult (RPKM 1.9), stomach adult (RPKM 1.8) and 18 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Hrh2 in Genome Data Viewer
    Location:
    13 B1; 13 28.4 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (54345990..54390201)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (54191970..54236182)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein, large, P0 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E8891 Neighboring gene predicted gene, 34640 Neighboring gene STARR-seq mESC enhancer starr_34580 Neighboring gene predicted gene 16578 Neighboring gene predicted gene, 40955 Neighboring gene predicted gene, 48622 Neighboring gene STARR-positive B cell enhancer ABC_E5398 Neighboring gene complexin 2 Neighboring gene STARR-positive B cell enhancer ABC_E11782 Neighboring gene STARR-positive B cell enhancer ABC_E7240

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables heterocyclic compound binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables histamine receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables histamine receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables histamine receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables neurotransmitter receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in chemical synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within digestive tract development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within epithelial cell morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within gastric acid secretion IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within gastrin-induced gastric acid secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within gland development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within histamine-induced gastric acid secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within memory IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of arachidonate secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of synaptic plasticity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within visual learning IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in dendrite IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    histamine H2 receptor
    Names
    gastric receptor I

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001010973.3NP_001010973.1  histamine H2 receptor isoform 1

      See identical proteins and their annotated locations for NP_001010973.1

      Status: VALIDATED

      Source sequence(s)
      AC163343, AC164086
      Consensus CDS
      CCDS26526.1
      UniProtKB/Swiss-Prot
      P97292, Q9D282
      UniProtKB/TrEMBL
      Q9QX37
      Related
      ENSMUSP00000038170.4, ENSMUST00000038101.4
      Conserved Domains (1) summary
      cd15051
      Location:19298
      7tmA_Histamine_H2R; histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. NM_001413010.1NP_001399939.1  histamine H2 receptor isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC163343, AC164086
      UniProtKB/TrEMBL
      A0A1B0GSX9
      Related
      ENSMUSP00000148117.2, ENSMUST00000209846.2

    RNA

    1. NR_153432.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC163343, AC164086
      Related
      ENSMUST00000211742.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      54345990..54390201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036157857.1XP_036013750.1  histamine H2 receptor isoform X2

      Conserved Domains (2) summary
      cd14964
      Location:4070
      7tm_GPCRs; TM helix 6 [structural motif]
      cl28897
      Location:2112
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. XM_036157856.1XP_036013749.1  histamine H2 receptor isoform X1

      UniProtKB/TrEMBL
      A0A1B0GSX9, Q9QX37
      Conserved Domains (1) summary
      cd15051
      Location:19298
      7tmA_Histamine_H2R; histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_008286.2: Suppressed sequence

      Description
      NM_008286.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.