U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 [ Mus musculus (house mouse) ]

    Gene ID: 320011, updated on 9-Dec-2024

    Summary

    Official Symbol
    Uggt1provided by MGI
    Official Full Name
    UDP-glucose glycoprotein glucosyltransferase 1provided by MGI
    Primary source
    MGI:MGI:2443162
    See related
    Ensembl:ENSMUSG00000037470 AllianceGenome:MGI:2443162
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GT; UGT1; Ugcgl1; 0910001L17Rik; A930007H10Rik; C820010P03Rik
    Summary
    Predicted to enable UDP-glucose:glycoprotein glucosyltransferase activity and unfolded protein binding activity. Predicted to be involved in ERAD pathway and protein N-linked glycosylation via asparagine. Predicted to be located in endoplasmic reticulum lumen and endoplasmic reticulum-Golgi intermediate compartment. Predicted to be part of protein-containing complex. Predicted to be active in endoplasmic reticulum. Orthologous to human UGGT1 (UDP-glucose glycoprotein glucosyltransferase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 12.4), placenta adult (RPKM 11.7) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Uggt1 in Genome Data Viewer
    Location:
    1 B; 1 15.15 cM
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (36179109..36283407, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (36140028..36244320, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene heparan sulfate 6-O-sulfotransferase 1 Neighboring gene predicted gene, 53548 Neighboring gene predicted gene, 33280 Neighboring gene microRNA 6897 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:36217172-36217379 Neighboring gene elongation factor RNA polymerase II 2 pseudogene Neighboring gene predicted gene, 39625 Neighboring gene STARR-positive B cell enhancer ABC_E4308 Neighboring gene neuralized E3 ubiquitin protein ligase 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Gene trapped (1) 
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables UDP-glucose:glycoprotein glucosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables UDP-glucose:glycoprotein glucosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables UDP-glucose:glycoprotein glucosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables unfolded protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables unfolded protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables unfolded protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in ERAD pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in UDP-glucosylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein N-linked glycosylation via asparagine IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum lumen ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum lumen ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in endoplasmic reticulum-Golgi intermediate compartment ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum-Golgi intermediate compartment ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of protein-containing complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    UDP-glucose:glycoprotein glucosyltransferase 1
    Names
    UDP--Glc:glycoprotein glucosyltransferase
    UDP-glucose ceramide glucosyltransferase-like 1
    UDP-glucose:glycoprotein glucosyltransferase

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198899.2NP_942602.2  UDP-glucose:glycoprotein glucosyltransferase 1 precursor

      See identical proteins and their annotated locations for NP_942602.2

      Status: VALIDATED

      Source sequence(s)
      AI877337, AK044321, AK134231, AK162491, BC062936, CD808359, CK639915
      Consensus CDS
      CCDS48238.1
      UniProtKB/Swiss-Prot
      E9QQ49, Q6NV70, Q6P5E4
      Related
      ENSMUSP00000037930.8, ENSMUST00000046875.14
      Conserved Domains (2) summary
      cd06432
      Location:12561503
      GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
      pfam06427
      Location:451202
      UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      36179109..36283407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496062.5XP_006496125.1  UDP-glucose:glycoprotein glucosyltransferase 1 isoform X1

      Conserved Domains (6) summary
      pfam06427
      Location:11081214
      UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
      pfam18400
      Location:57237
      Thioredoxin_12; Thioredoxin-like domain
      pfam18401
      Location:310440
      Thioredoxin_13; Thioredoxin-like domain
      pfam18402
      Location:451699
      Thioredoxin_14; Thioredoxin-like domain
      pfam18403
      Location:722947
      Thioredoxin_15; Thioredoxin-like domain
      pfam18404
      Location:12481515
      Glyco_transf_24; Glucosyltransferase 24