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    hypothetical protein (DUF626) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839007, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF626)
    Primary source
    TAIR:AT1G23960
    Locus tag
    AT1G23960
    See related
    Araport:AT1G23960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T23E23.14; T23E23_14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (8478391..8480356, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene apoptosis inhibitory protein Neighboring gene hypothetical protein (DUF626) Neighboring gene transcription factor Neighboring gene hypothetical protein (DUF626)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036009.1
    NM_102243.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF626)
    NP_001031086.1
    • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT1G23970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_173807.2
    • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT1G23970.1); Has 197 Blast hits to 196 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 197; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8478391..8480356 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102243.4 → NP_173807.2  hypothetical protein (DUF626) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173807.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RXM6, Q9LR96
      UniProtKB/TrEMBL
      A0A178WG05
      Conserved Domains (1) summary
      cl19902
      Location:12 → 291
      protein_MS5; Protein MS5

    2. NM_001036009.1 → NP_001031086.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031086.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RXM6, Q9LR96
      UniProtKB/TrEMBL
      A0A178WG05
      Conserved Domains (1) summary
      cl19902
      Location:12 → 291
      protein_MS5; Protein MS5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RXM6.1

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