U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CIPK17 CBL-interacting protein kinase 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841246, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CIPK17
    Official Full Name
    CBL-interacting protein kinase 17
    Primary source
    TAIR:AT1G48260
    Locus tag
    AT1G48260
    See related
    Araport:AT1G48260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CBL-interacting protein kinase 17; CBL-interacting protein kinase 17; F21D18.2; SNF1-RELATED PROTEIN KINASE 3.21; SnRK3.21
    Summary
    Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.21), which has also been reported as a member of the CBL-interacting protein kinases (CIPK17).
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CIPK17 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (17813886..17817441, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene Putative plant snare 12 Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Comprehensive structural, interaction and expression analysis of CBL and CIPK complement during abiotic stresses and development in rice. Kanwar P, et al. Cell Calcium, 2014 Aug. PMID 24970010
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_001333316.1
    NM_001333317.1
    NM_001333318.1
    NM_001333319.1
    NM_103723.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    CBL-interacting protein kinase 17
    NP_175260.1
    • CBL-interacting protein kinase 17 (CIPK17); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 1 (TAIR:AT3G17510.1); Has 126535 Blast hits to 124591 proteins in 3565 species: Archae - 145; Bacteria - 14911; Metazoa - 46222; Fungi - 12574; Plants - 31282; Viruses - 516; Other Eukaryotes - 20885 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17813886..17817441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103723.4 → NP_175260.1  CBL-interacting protein kinase 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175260.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94C40, Q9LNH7, Q9SX61
      UniProtKB/TrEMBL
      A0A178W2Q7, A0A5S9WN37, A0A7G2E2E8
      Conserved Domains (3) summary
      cd12195
      Location:307 → 418
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      smart00220
      Location:11 → 266
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:10 → 265
      PKc_like; Protein Kinases, catalytic domain

    2. NM_001333316.1 → NP_001320279.1  CBL-interacting protein kinase 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4G8, A0A1P8AMC0
      Conserved Domains (2) summary
      cd12195
      Location:222 → 333
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:1 → 180
      PKc_like; Protein Kinases, catalytic domain

    3. NM_001333317.1 → NP_001320280.1  CBL-interacting protein kinase 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4G8, A0A1P8AMC0
      Conserved Domains (2) summary
      cd12195
      Location:222 → 333
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:1 → 180
      PKc_like; Protein Kinases, catalytic domain

    4. NM_001333319.1 → NP_001320278.1  CBL-interacting protein kinase 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4G8, A0A1P8AMC0
      Conserved Domains (2) summary
      cd12195
      Location:222 → 333
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:1 → 180
      PKc_like; Protein Kinases, catalytic domain

    5. NM_001333318.1 → NP_001320277.1  CBL-interacting protein kinase 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4G8, A0A1P8AMC0
      Conserved Domains (2) summary
      cd12195
      Location:222 → 333
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:1 → 180
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94C40.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.