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    NAP7 non-intrinsic ABC protein 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820236, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NAP7
    Official Full Name
    non-intrinsic ABC protein 7
    Primary source
    TAIR:AT3G10670
    Locus tag
    AT3G10670
    See related
    Araport:AT3G10670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ABCI6; ATNAP7; ATP-binding cassette I6; non-intrinsic ABC protein 7
    Summary
    Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged Fe#AeiS clusters. Expressed in embryos and meristems.
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    Genomic context

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    See NAP7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (3335004..3337446, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene SNF7 family protein Neighboring gene nuclear pore complex protein Neighboring gene calmodulin-domain protein kinase cdpk isoform 2 Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene DNA GYRASE A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtNAP7 is a plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Xu XM, et al. Proc Natl Acad Sci U S A, 2004 Jun 15. PMID 15184673, Free PMC Article
    2. AtNAP1 represents an atypical SufB protein in Arabidopsis plastids. Xu XM, et al. J Biol Chem, 2005 Feb 25. PMID 15611066, Free PMC Article
    3. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    4. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Rutschow H, et al. Plant Physiol, 2008 Sep. PMID 18633119, Free PMC Article
    5. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_111903.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within iron-sulfur cluster assembly IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within thylakoid membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    non-intrinsic ABC protein 7
    NP_187678.1
    • non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3335004..3337446 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111903.3 → NP_187678.1  non-intrinsic ABC protein 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187678.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LF74, Q9CAF5, Q9LPN3, Q9SG74
      UniProtKB/TrEMBL
      A0A178VCA7, A0A7G2EJJ6
      Conserved Domains (1) summary
      CHL00131
      Location:89 → 336
      ycf16; sulfate ABC transporter protein; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAF5.1

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