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    OLEO4 oleosin 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822388, updated on 18-Sep-2024

    Summary

    Official Symbol
    OLEO4
    Official Full Name
    oleosin 4
    Primary source
    TAIR:AT3G27660
    Locus tag
    AT3G27660
    See related
    Araport:AT3G27660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    OLE3; OLEOSIN 3; oleosin 4
    Summary
    Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.
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    Genomic context

    See OLEO4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (10243244..10245023)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene LOB domain-containing protein 25 Neighboring gene ARM repeat superfamily protein Neighboring gene Plant self-incompatibility protein S1 family

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001338903.1
    NM_113682.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to freezing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within seed germination IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within seed oilbody biogenesis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in monolayer-surrounded lipid storage body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    oleosin 4
    NP_189403.1
    • oleosin 4 (OLEO4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: hypocotyl, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 2 (TAIR:AT5G40420.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10243244..10245023
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113682.4NP_189403.1  oleosin 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189403.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q42180, Q42229, Q42431, Q8LDN9, Q96277
      UniProtKB/TrEMBL
      A0A178V6F1, A0A5S9XG94
      Conserved Domains (1) summary
      pfam01277
      Location:50162
      Oleosin
    2. NM_001338903.1NP_001326794.1  oleosin 4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q42180, Q42229, Q42431, Q8LDN9, Q96277
      UniProtKB/TrEMBL
      A0A178V6F1, A0A5S9XG94
      Conserved Domains (1) summary
      pfam01277
      Location:50162
      Oleosin