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    FRUCT5 beta-fructofuranosidase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841955, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FRUCT5
    Official Full Name
    beta-fructofuranosidase 5
    Primary source
    TAIR:AT1G55120
    Locus tag
    AT1G55120
    See related
    Araport:AT1G55120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    6-fructan exohydrolase; AtcwINV3; ATFRUCT5; BETA-FRUCTOFURANOSIDASE; beta-fructofuranosidase 5; T7N22.6; T7N22_6
    Summary
    Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.
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    Genomic context

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    See FRUCT5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (20566030..20569322)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene carbon-nitrogen hydrolase family protein Neighboring gene pseudo Neighboring gene indeterminate(ID)-domain 7 Neighboring gene Endomembrane protein 70 protein family Neighboring gene Ribonuclease III family protein Neighboring gene DEA(D/H)-box RNA helicase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001124022.2
    NM_104385.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables fructan beta-fructosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables levanase activity IDA
    Inferred from Direct Assay
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    beta-fructofuranosidase 5
    NP_001117494.1
    • beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001185230.1
    • beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2).
    NP_564676.1
    • beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.1); Has 4220 Blast hits to 4164 proteins in 1248 species: Archae - 18; Bacteria - 2575; Metazoa - 95; Fungi - 293; Plants - 1036; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20566030..20569322
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198301.1 → NP_001185230.1  beta-fructofuranosidase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185230.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EJ38, F4HYP3
      Conserved Domains (3) summary
      smart00640
      Location:35 → 513
      Glyco_32; Glycosyl hydrolases family 32
      pfam00251
      Location:35 → 350
      Glyco_hydro_32N; Glycosyl hydrolases family 32 N-terminal domain
      pfam08244
      Location:422 → 513
      Glyco_hydro_32C; Glycosyl hydrolases family 32 C terminal

    2. NM_001333690.1 → NP_001320753.1  beta-fructofuranosidase 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANV4, A0A654EJ38
      Conserved Domains (1) summary
      smart00640
      Location:13 → 488
      Glyco_32; Glycosyl hydrolases family 32

    3. NM_104385.4 → NP_564676.1  beta-fructofuranosidase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564676.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XZ3, Q9C721, Q9SLS5
      UniProtKB/TrEMBL
      A0A178WCE8, A0A5S9WM16
      Conserved Domains (1) summary
      smart00640
      Location:43 → 528
      Glyco_32; Glycosyl hydrolases family 32

    4. NM_001124022.2 → NP_001117494.1  beta-fructofuranosidase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117494.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EJ38, B6EUC8
      Conserved Domains (3) summary
      smart00640
      Location:17 → 489
      Glyco_32; Glycosyl hydrolases family 32
      pfam00251
      Location:17 → 326
      Glyco_hydro_32N; Glycosyl hydrolases family 32 N-terminal domain
      pfam08244
      Location:398 → 489
      Glyco_hydro_32C; Glycosyl hydrolases family 32 C terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67XZ3.2

    Gene LinkOut

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