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    BTB/POZ domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824242, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BTB/POZ domain protein
    Primary source
    TAIR:AT3G50780
    Locus tag
    AT3G50780
    See related
    Araport:AT3G50780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (18875399..18877744, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene galacturonosyltransferase-like 2 Neighboring gene calmodulin-like 41 Neighboring gene esterase/lipase/thioesterase family protein Neighboring gene uncharacterized protein Neighboring gene PLATZ transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_114938.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain protein
    NP_190647.1
    • BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18875399..18877744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339480.1 → NP_001326763.1  BTB/POZ domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SVM0
      UniProtKB/TrEMBL
      A0A178VCM1

    2. NM_114938.4 → NP_190647.1  BTB/POZ domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190647.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SVM0
      UniProtKB/TrEMBL
      A0A178VCM1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SVM0.1

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